Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
---|---|---|---|---|---|---|---|---|---|
THCA | rs8003616 | chr14:52646094 | C/T | ATP5I | chr4:666225-668127:- | -0.19 | -6.34 | 5.43E-10 | Box Plot |
THCA | rs8003616 | chr14:52646094 | C/T | TBCA | chr5:76986991-77164604:- | -0.23 | -6.11 | 2.05E-9 | Box Plot |
THCA | rs8003621 | chr14:39891394 | G/A | LOC647288 | chr13:75811890-75814517:- | -0.49 | -8.92 | 9.95E-18 | Box Plot |
THCA | rs8004348 | chr14:39733058 | G/A | LOC647288 | chr13:75811890-75814517:- | -0.51 | -9.27 | 6.17E-19 | Box Plot |
THCA | rs8004495 | chr14:26495358 | A/G | C20orf43 | chr20:55043647-55093942:+ | 0.24 | 6.03 | 3.21E-9 | Box Plot |
THCA | rs8004716 | chr14:39772020 | A/T | LOC647288 | chr13:75811890-75814517:- | -0.51 | -9.47 | 1.29E-19 | Box Plot |
THCA | rs8006123 | chr14:39900672 | T/C | LOC647288 | chr13:75811890-75814517:- | -0.49 | -8.91 | 1.07E-17 | Box Plot |
THCA | rs8006182 | chr14:39837040 | T/C | LOC647288 | chr13:75811890-75814517:- | 0.48 | 8.75 | 3.78E-17 | Box Plot |
THCA | rs8006321 | chr14:39886381 | T/C | LOC647288 | chr13:75811890-75814517:- | -0.48 | -8.7 | 5.34E-17 | Box Plot |
THCA | rs8006893 | chr14:39886707 | T/C | LOC647288 | chr13:75811890-75814517:- | 0.49 | 10.19 | 3.52E-22 | Box Plot |
THCA | rs8007252 | chr14:39800798 | G/C | LOC647288 | chr13:75811890-75814517:- | -0.53 | -9.81 | 8.01E-21 | Box Plot |
THCA | rs8008580 | chr14:66777191 | C/G | ATP6V1D | chr14:67761088-67826982:- | 0.42 | 7.41 | 5.72E-13 | Box Plot |
THCA | rs8009043 | chr14:66710103 | A/G | ATP6V1D | chr14:67761088-67826982:- | 0.37 | 6.79 | 3.43E-11 | Box Plot |
THCA | rs80094413 | chr6:151763283 | A/G | NEK5 | chr13:52607747-52703214:- | 0.63 | 7.57 | 1.96E-13 | Box Plot |
THCA | rs8009651 | chr14:39755307 | G/A | LOC647288 | chr13:75811890-75814517:- | 0.61 | 13.03 | 2.07E-33 | Box Plot |