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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8003616 chr14:52646094 C/T ATP5I chr4:666225-668127:- -0.19 -6.34 5.43E-10 Box Plot
THCA rs8003616 chr14:52646094 C/T TBCA chr5:76986991-77164604:- -0.23 -6.11 2.05E-9 Box Plot
THCA rs8003621 chr14:39891394 G/A LOC647288 chr13:75811890-75814517:- -0.49 -8.92 9.95E-18 Box Plot
THCA rs8004348 chr14:39733058 G/A LOC647288 chr13:75811890-75814517:- -0.51 -9.27 6.17E-19 Box Plot
THCA rs8004495 chr14:26495358 A/G C20orf43 chr20:55043647-55093942:+ 0.24 6.03 3.21E-9 Box Plot
THCA rs8004716 chr14:39772020 A/T LOC647288 chr13:75811890-75814517:- -0.51 -9.47 1.29E-19 Box Plot
THCA rs8006123 chr14:39900672 T/C LOC647288 chr13:75811890-75814517:- -0.49 -8.91 1.07E-17 Box Plot
THCA rs8006182 chr14:39837040 T/C LOC647288 chr13:75811890-75814517:- 0.48 8.75 3.78E-17 Box Plot
THCA rs8006321 chr14:39886381 T/C LOC647288 chr13:75811890-75814517:- -0.48 -8.7 5.34E-17 Box Plot
THCA rs8006893 chr14:39886707 T/C LOC647288 chr13:75811890-75814517:- 0.49 10.19 3.52E-22 Box Plot
THCA rs8007252 chr14:39800798 G/C LOC647288 chr13:75811890-75814517:- -0.53 -9.81 8.01E-21 Box Plot
THCA rs8008580 chr14:66777191 C/G ATP6V1D chr14:67761088-67826982:- 0.42 7.41 5.72E-13 Box Plot
THCA rs8009043 chr14:66710103 A/G ATP6V1D chr14:67761088-67826982:- 0.37 6.79 3.43E-11 Box Plot
THCA rs80094413 chr6:151763283 A/G NEK5 chr13:52607747-52703214:- 0.63 7.57 1.96E-13 Box Plot
THCA rs8009651 chr14:39755307 G/A LOC647288 chr13:75811890-75814517:- 0.61 13.03 2.07E-33 Box Plot